Next release od BWA cuda. structure is changed as well as fasta format is included
authorNeelesh Soni <neelrocks4@gmail.com>
Fri, 28 Jan 2011 16:33:43 +0000 (22:03 +0530)
committerNeelesh Soni <neelrocks4@gmail.com>
Fri, 28 Jan 2011 16:33:43 +0000 (22:03 +0530)
commit5acb7490983e8397002f4f85664f7e1f341e5373
treeeaae0a489fd73b70bf6f6821282c23f43cb2ce05
parent6dba7456428079c98370be6d93e875b043863d8c
Next release od BWA cuda. structure is changed as well as fasta format is included
52 files changed:
Makefile
bwasa [deleted file]
calculated.c [deleted file]
calculatedinverse.c [deleted file]
construct_E.c [deleted file]
fasta code/a.out [deleted file]
fasta code/fasta.c [deleted file]
fasta code/fasta.h [deleted file]
fasta code/fastaquery.c [deleted file]
fasta code/fastqtest.fastq [deleted file]
fasta code/other/Makefile [deleted file]
fasta code/other/bisect.c [deleted file]
fasta code/other/global.c [deleted file]
fasta code/testfile [deleted file]
fasta.c [deleted file]
fasta.h [deleted file]
fasta_src/fasta.c [new file with mode: 0644]
fasta_src/fasta.h [new file with mode: 0644]
fasta_src/fastaquery.c [new file with mode: 0644]
fasta_src/fastqtest.fastq [new file with mode: 0644]
fasta_src/testfile [new file with mode: 0644]
find_ESA.c [deleted file]
find_SA.c [deleted file]
find_gaps.c [deleted file]
find_last_match.c [deleted file]
find_root.c [deleted file]
functions.h [deleted file]
include/fasta.h [new file with mode: 0644]
include/functions.h [new file with mode: 0644]
inputfiles/rb.dat [new file with mode: 0644]
inputfiles/rb1.dat [new file with mode: 0644]
inputfiles/testfile [new file with mode: 0644]
occurfile.c [deleted file]
qsufsort.c [deleted file]
rare_seg.c [deleted file]
rb.dat [deleted file]
rb1.dat [deleted file]
src/calculated.c [new file with mode: 0644]
src/calculatedinverse.c [new file with mode: 0644]
src/construct_E.c [new file with mode: 0644]
src/fasta.c [new file with mode: 0644]
src/find_ESA.c [new file with mode: 0644]
src/find_SA.c [new file with mode: 0644]
src/find_gaps.c [new file with mode: 0644]
src/find_last_match.c [new file with mode: 0644]
src/find_root.c [new file with mode: 0644]
src/occurfile.c [new file with mode: 0644]
src/qsufsort.c [new file with mode: 0644]
src/rare_seg.c [new file with mode: 0644]
src/suftest.c [new file with mode: 0644]
suftest.c [deleted file]
testfile